Acta Prataculturae Sinica ›› 2024, Vol. 33 ›› Issue (7): 84-93.DOI: 10.11686/cyxb2023273
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Fang WANG1,2(), Shi-zi ZHANG1, Rong-hui DAI1,2, Li-yun YANG1,2, Li-juan LUO1,2, Ling-yan JIANG1,2()
Received:
2023-08-05
Revised:
2023-11-08
Online:
2024-07-20
Published:
2024-04-08
Contact:
Ling-yan JIANG
Fang WANG, Shi-zi ZHANG, Rong-hui DAI, Li-yun YANG, Li-juan LUO, Ling-yan JIANG. Screening and verification of SgMPK6-interacting proteins of Stylosanthes[J]. Acta Prataculturae Sinica, 2024, 33(7): 84-93.
引物名称 Primer names | 序列 Sequences (5′-3′) |
---|---|
pGBKT7-SgMPK6-F | CATGGAGGCCGAATTCATGGAAGGAGGAGCTGC |
pGBKT7-SgMPK6-R | GCAGGTCGACGGATCCACTGATATTCCGGGTTAAATGCC |
pGBKT7-SgMPK6-KD-F | CATGGAGGCCGAATTCTTCGAAGTCACCGCCAAATAC |
pGBKT7-SgMPK6-KD-R | GCAGGTCGACGGATCCACGGGTTAAATGCCAGAGACT |
pGADT7-SgbHLH32-F | GGAGGCCAGTGAATTCATGGGGTGCAACAAAGGG |
pGADT7-SgbHLH32-R | CGAGCTCGATGGATCCATTATTGGAACTGTACCAACTCACC |
pGADT7-SgbHLH33-F | GGAGGCCAGTGAATTCATGGAGAGAGACATGCTTCC |
pGADT7-SgbHLH33-R | CGAGCTCGATGGATCCATCACATCATGTCATGGATCCC |
pGADT7-SgbHLH44-F | GGAGGCCAGTGAATTCATGCATATGAGAGGTTTGTTTCC |
pGADT7-SgbHLH44-R | CGAGCTCGATGGATCCACTATGAATGGGTGTTGGATTCAG |
qRT-SgbHLH32-F | AAATCAGGAGCTTGAATCACGT |
qRT-SgbHLH32-R | CACATGCAAATCCACCATCCTC |
qRT-SgbHLH33-F | CGTACCCACTACTGCTGCTG |
qRT-SgbHLH33-R | TGTCAGGTCCGAAATCGAAGG |
qRT-SgbHLH44-F | GTCGAGCAGGGTGAGGAAGTA |
qRT-SgbHLH44-R | CATGGCTGCTCCAACATCTTC |
UBCE1-F | CAGATCAAGCTGCTGACGAA |
UBCE1-R | GAACAAGCGATCATCAGGTTT |
Table 1 Primer sequences used in the experiment
引物名称 Primer names | 序列 Sequences (5′-3′) |
---|---|
pGBKT7-SgMPK6-F | CATGGAGGCCGAATTCATGGAAGGAGGAGCTGC |
pGBKT7-SgMPK6-R | GCAGGTCGACGGATCCACTGATATTCCGGGTTAAATGCC |
pGBKT7-SgMPK6-KD-F | CATGGAGGCCGAATTCTTCGAAGTCACCGCCAAATAC |
pGBKT7-SgMPK6-KD-R | GCAGGTCGACGGATCCACGGGTTAAATGCCAGAGACT |
pGADT7-SgbHLH32-F | GGAGGCCAGTGAATTCATGGGGTGCAACAAAGGG |
pGADT7-SgbHLH32-R | CGAGCTCGATGGATCCATTATTGGAACTGTACCAACTCACC |
pGADT7-SgbHLH33-F | GGAGGCCAGTGAATTCATGGAGAGAGACATGCTTCC |
pGADT7-SgbHLH33-R | CGAGCTCGATGGATCCATCACATCATGTCATGGATCCC |
pGADT7-SgbHLH44-F | GGAGGCCAGTGAATTCATGCATATGAGAGGTTTGTTTCC |
pGADT7-SgbHLH44-R | CGAGCTCGATGGATCCACTATGAATGGGTGTTGGATTCAG |
qRT-SgbHLH32-F | AAATCAGGAGCTTGAATCACGT |
qRT-SgbHLH32-R | CACATGCAAATCCACCATCCTC |
qRT-SgbHLH33-F | CGTACCCACTACTGCTGCTG |
qRT-SgbHLH33-R | TGTCAGGTCCGAAATCGAAGG |
qRT-SgbHLH44-F | GTCGAGCAGGGTGAGGAAGTA |
qRT-SgbHLH44-R | CATGGCTGCTCCAACATCTTC |
UBCE1-F | CAGATCAAGCTGCTGACGAA |
UBCE1-R | GAACAAGCGATCATCAGGTTT |
基因ID Gene ID | 拟南芥编号Arabidopsis number | 蛋白质名称Protein name |
---|---|---|
Unigene15192_SG | AT1G74110.1 | 细胞色素P450家族蛋白 Cytochrome P450 family protein |
CL672.Contig2_SG | AT1G12860.1 | bHLH转录因子33 bHLH transcription factor 33 |
Unigene44350_SG | AT2G42380.2 | bZIP转录因子家族蛋白 bZIP transcription factor family protein |
CL7251.Contig3_SG | AT5G66540.1 | U3小核仁核糖核蛋白 U3 small nucleolar ribonucleoprotein |
Unigene29237_SG | AT5G17820.1 | 过氧化物酶超家族蛋白 Peroxidase superfamily protein |
CL1493.Contig6_SG | AT3G25710.1 | bHLH转录因子32 bHLH transcription factor 32 |
Unigene3271_SG | AT3G25230.1 | FK506结合蛋白62 FK506 binding protein 62 |
CL3082.Contig4_SG | AT4G16190.1 | 半胱氨酸蛋白酶RD19C Cysteine protease RD19C |
CL3756.Contig1_SG | AT1G18400.1 | bHLH转录因子44 bHLH transcription factor 44 |
Table 2 Partial results of sequence analysis of yeast positive clones
基因ID Gene ID | 拟南芥编号Arabidopsis number | 蛋白质名称Protein name |
---|---|---|
Unigene15192_SG | AT1G74110.1 | 细胞色素P450家族蛋白 Cytochrome P450 family protein |
CL672.Contig2_SG | AT1G12860.1 | bHLH转录因子33 bHLH transcription factor 33 |
Unigene44350_SG | AT2G42380.2 | bZIP转录因子家族蛋白 bZIP transcription factor family protein |
CL7251.Contig3_SG | AT5G66540.1 | U3小核仁核糖核蛋白 U3 small nucleolar ribonucleoprotein |
Unigene29237_SG | AT5G17820.1 | 过氧化物酶超家族蛋白 Peroxidase superfamily protein |
CL1493.Contig6_SG | AT3G25710.1 | bHLH转录因子32 bHLH transcription factor 32 |
Unigene3271_SG | AT3G25230.1 | FK506结合蛋白62 FK506 binding protein 62 |
CL3082.Contig4_SG | AT4G16190.1 | 半胱氨酸蛋白酶RD19C Cysteine protease RD19C |
CL3756.Contig1_SG | AT1G18400.1 | bHLH转录因子44 bHLH transcription factor 44 |
蛋白 Protein | 磷酸化位点 Phosphorylation site | 磷酸化肽段 Phosphorylation peptides | 可信值Trusted value |
---|---|---|---|
SgbHLH32 | 124 S | LNAI | 0.506 |
SgbHLH33 | 393 T | LQPL | 0.615 |
SgbHLH44 | 16 S | QLHN | 0.512 |
SgbHLH44 | 47 T | QRQQ | 0.533 |
Table 3 Phosphorylation sites and score statistics of MAPK substrates
蛋白 Protein | 磷酸化位点 Phosphorylation site | 磷酸化肽段 Phosphorylation peptides | 可信值Trusted value |
---|---|---|---|
SgbHLH32 | 124 S | LNAI | 0.506 |
SgbHLH33 | 393 T | LQPL | 0.615 |
SgbHLH44 | 16 S | QLHN | 0.512 |
SgbHLH44 | 47 T | QRQQ | 0.533 |
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